| Matrix Name And Description |
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V$AARE.01 - Amino acid response element, ATF4 binding site
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V$AHR.01 - Aryl hydrocarbon / dioxin receptor
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V$AHRARNT.01 - Aryl hydrocarbon receptor / Arnt heterodimers
|
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V$AHRARNT.02 - Aryl hydrocarbon / Arnt heterodimers, fixed core
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V$AHRARNT.03 - DRE (dioxin response elements), XRE (xenobiotic response elements) bound by AHR/ARNT heterodimers
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V$NXF_ARNT.01 - bHLH-PAS type transcription factors NXF/ARNT heterodimer
|
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V$AIRE.01 - Autoimmune regulator
|
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V$AP1.01 - Activator protein 1
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V$AP1.02 - Activator protein 1
|
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V$AP1.03 - Activator protein 1
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V$AP1FJ.01 - Activator protein 1
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V$BACH1.01 - BTB/POZ-bZIP transcription factor BACH1 forms heterodimers with the small Maf protein family
|
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V$BACH2.01 - Bach2 bound TRE
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V$MARE.01 - Maf response elements, half sites
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V$MARE.02 - Binding sites for homodimers of large Maf-proteins
|
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V$MARE.03 - Binding sites for heterodimers with small Maf-proteins
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V$MARE_ARE.01 - Antioxidant response elements
|
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V$NFE2.01 - NF-E2 p45
|
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V$NFE2L2.01 - Nuclear factor (erythroid-derived 2)-like 2, NRF2
|
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V$TCF11MAFG.01 - TCF11/MafG heterodimers, binding to subclass of AP1 sites
|
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V$VMAF.01 - v-Maf
|
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V$AP2.01 - Activator protein 2
|
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V$AP2.02 - Activator protein 2 alpha
|
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V$AP4.01 - Activator protein 4
|
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V$AP4.02 - Activator protein 4
|
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V$AP4.03 - Activator protein 4
|
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V$LYL1_E12.01 - LYL1-E12 heterodimeric complex
|
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V$PARAXIS.01 - Paraxis (TCF15), member of the Twist subfamily of Class B bHLH factors, forms heterodimers with E12
|
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V$TAL1ALPHAE47.01 - Tal-1alpha/E47 heterodimer
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V$TAL1BETAE47.01 - Tal-1beta/E47 heterodimer
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V$TAL1BETAHEB.01 - Tal-1beta/HEB heterodimer
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V$TAL1BETAITF2.01 - Tal-1beta/ITF-2 heterodimer
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V$TH1E47.01 - Thing1/E47 heterodimer, TH1 bHLH member specific expression in a variety of embryonic tissues
|
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V$AREB6.01 - AREB6 (Atp1a1 regulatory element binding factor 6)
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V$AREB6.02 - AREB6 (Atp1a1 regulatory element binding factor 6)
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V$AREB6.03 - AREB6 (Atp1a1 regulatory element binding factor 6)
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V$AREB6.04 - AREB6 (Atp1a1 regulatory element binding factor 6)
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V$MRF2.01 - Modulator recognition factor 2 (MRF2, ARID5B)
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V$ARP1.01 - apolipoprotein AI regulatory protein 1
|
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V$ATBF1.01 - AT-binding transcription factor 1
|
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V$BARBIE.01 - Barbiturate-inducible element
|
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V$BCL6.01 - POZ/zinc finger protein, transcriptional repressor, translocations observed in diffuse large cell lymphoma
|
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V$BCL6.02 - POZ/zinc finger protein, transcriptional repressor, translocations observed in diffuse large cell lymphoma
|
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V$BEL1.01 - Bel-1 similar region (defined in Lentivirus LTRs)
|
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V$BNC.01 - Basonuclin, cooperates with USF1 in rDNA PolI transcription)
|
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V$BRACH.01 - Brachyury
|
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V$TBOX.01 - T-box transcription factor binding sites
|
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V$TBX5.01 - T-Box factor 5 site (TBX5), mutations related to Holt-Oram syndrome
|
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V$TBX6.01 - T-Box family transcription factor
|
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V$BRN2.01 - Brn-2, POU-III protein class
|
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V$BRN2.02 - Brn-2, POU-III protein class
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V$BRN2.03 - Brn-2, POU-III protein class
|
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V$BRN3.01 - Brn-3, POU-IV protein class
|
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V$BRN3.02 - Brn-3, POU-IV protein class
|
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V$BRN4.01 - POU domain transcription factor brain 4
|
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V$BRN5.01 - Brn-5, POU-VI protein class (also known as emb and CNS-1)
|
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V$KAISO.01 - Transcription factor Kaiso, ZBTB33
|
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V$CABL.01 - Multifunctional c-Abl src type tyrosine kinase
|
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V$CART1.01 - Cart-1 (cartilage homeoprotein 1)
|
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V$XVENT2.01 - Xenopus homeodomain factor Xvent-2; early BMP signaling response
|
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V$CDE.01 - Cell cycle-dependent element, CDF-1 binding site (CDE/CHR tandem elements regulate cell cycle dependent repression)
|
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V$CDX1.01 - Intestine specific homeodomain factor CDX-1
|
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V$CDX2.01 - Cdx-2 mammalian caudal related intestinal transcr. factor
|
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V$CEBP.02 - CCAAT/enhancer binding protein
|
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V$CEBPB.01 - CCAAT/enhancer binding protein beta
|
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V$CHOP.01 - Heterodimers of CHOP and C/EBPalpha
|
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V$CHOP.02 - Heterodimers of CHOP and C/EBPalpha
|
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V$CHREBP_MLX.01 - Carbohydrate response element binding protein (CHREBP) and Max-like protein X (Mlx) bind as heterodimers to glucose-responsive promoters
|
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V$CHR.01 - Cell cycle gene homology region (CDE/CHR tandem elements regulate cell cycle dependent repression)
|
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V$NMP4.01 - NMP4 (nuclear matrix protein 4) / CIZ (Cas-interacting zinc finger protein)
|
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V$CDP.01 - Cut-like homeodomain protein
|
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V$CDP.02 - Transcriptional repressor CDP
|
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V$CDPCR3.01 - Cut-like homeodomain protein
|
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V$CDPCR3HD.01 - cut-like homeodomain protein
|
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V$CLOX.01 - Clox
|
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V$CUT2.01 - Cut repeat II
|
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V$CMYB.01 - c-Myb, important in hematopoesis, cellular equivalent to avian myoblastosis virus oncogene v-myb
|
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V$CMYB.02 - c-Myb, important in hematopoesis, cellular equivalent to avian myoblastosis virus oncogene v-myb
|
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V$COMP1.01 - COMP1, cooperates with myogenic proteins in multicomponent complex
|
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V$COUP.01 - COUP antagonizes HNF-4 by binding site competition or synergizes by direct protein - protein interaction with HNF-4
|
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V$CP2.01 - CP2
|
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V$CP2.02 - LBP-1c (leader-binding protein-1c), LSF (late SV40 factor), CP2, SEF (SAA3 enhancer factor)
|
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V$ATF.01 - Activating transcription factor
|
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V$ATF.02 - Activating transcription factor
|
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V$ATF2.01 - Activating transcription factor 2
|
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V$ATF6.02 - Activating transcription factor 6, member of b-zip family, induced by ER stress
|
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V$CJUN_ATF2.01 - c-Jun/ATF2 heterodimers
|
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V$CREB.01 - cAMP-responsive element binding protein
|
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V$CREB.02 - cAMP-responsive element binding protein
|
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V$CREB.03 - cAMP-response element-binding protein
|
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V$CREB.04 - cAMP-response element binding protein
|
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V$CREB1.01 - cAMP-responsive element binding protein 1
|
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V$CREB2.01 - cAMP-responsive element binding protein 2
|
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V$CREB2CJUN.01 - CRE-binding protein 2/c-Jun heterodimer
|
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V$CREBP1.01 - cAMP-responsive element binding protein 1
|
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V$CREBP1.02 - CRE-binding protein 1
|
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V$CREBP1CJUN.01 - CRE-binding protein 1/c-Jun heterodimer
|
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V$E4BP4.01 - E4BP4, bZIP domain, transcriptional repressor
|
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V$TAXCREB.01 - Tax/CREB complex
|
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V$TAXCREB.02 - Tax/CREB complex
|
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V$VJUN.01 - v-Jun
|
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V$DREAM.01 - Downstream regulatory element-antagonist modulator, Ca2+-binding protein of the neuronal calcium sensors family that binds DRE (downstream regulatory element) sites as a tetramer
|
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V$NUDR.01 - NUDR (nuclear DEAF-1 related transcriptional regulator protein)
|
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V$DICE.01 - Downstream Immunoglobulin Control Element, interacting factor: BEN (also termed Mus-TRD1 and WBSCR11)
|
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V$DMP1.01 - Cyclin D-interacting myb-like protein, DMTF1 - cyclin D binding myb-like transcription factor 1
|
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V$E2F.01 - E2F, involved in cell cycle regulation, interacts with Rb p107 protein
|
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V$E2F.02 - E2F, involved in cell cycle regulation, interacts with Rb p107 protein
|
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V$E2F.03 - E2F, involved in cell cycle regulation, interacts with Rb p107 protein
|
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V$E2F1_DP1.01 - E2F-1/DP-1 heterodimeric complex
|
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V$E2F1_DP2.01 - E2F-1/DP-2 heterodimeric complex
|
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V$E2F4_DP1.01 - E2F-4/DP-1 heterodimeric complex
|
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V$E2F4_DP2.01 - E2F-4/DP-2 heterodimeric complex
|
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V$RB_E2F1_DP1.01 - RB/E2F-1/DP-1 heterotrimeric complex
|
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V$E2.01 - BPV bovine papilloma virus regulator E2
|
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V$E2.02 - Papilloma virus regulator E2
|
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V$E4F.01 - GLI-Krueppel-related transcription factor, regulator of adenovirus E4 promoter
|
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V$DELTAEF1.01 - deltaEF1
|
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V$SIP1.01 - Smad-interacting protein
|
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V$XBP1.01 - X-box-binding protein 1
|
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V$ATF6.01 - Member of b-zip family, induced by ER damage/stress, binds to the ERSE in association with NF-Y
|
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V$MAX.01 - Max
|
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V$MYCMAX.01 - c-Myc/Max heterodimer
|
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V$MYCMAX.02 - c-Myc/Max heterodimer
|
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V$MYCMAX.03 - MYC-MAX binding sites
|
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V$NMYC.01 - N-Myc
|
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V$SREBP.01 - Sterol regulatory element binding protein 1 and 2
|
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V$SREBP.02 - Sterol regulatory element binding protein
|
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V$SREBP.03 - Sterol regulatory element binding protein
|
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V$USF.01 - Upstream stimulating factor
|
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V$USF.02 - Upstream stimulating factor
|
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V$USF.03 - Upstream stimulating factor
|
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V$USF.04 - Upstream stimulating factor 1/2
|
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V$NFY.01 - Nuclear factor Y (Y-box binding factor)
|
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V$NFY.02 - Nuclear factor Y (Y-box binding factor)
|
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V$NFY.03 - Nuclear factor Y (Y-box binding factor)
|
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V$CKROX.01 - Collagen krox protein (zinc finger protein 67 - zfp67)
|
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V$EGR1.01 - Egr-1/Krox-24/NGFI-A immediate-early gene product
|
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V$EGR1.02 - EGR1, early growth response 1
|
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V$EGR2.01 - Egr-2/Krox-20 early growth response gene product
|
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V$EGR3.01 - Early growth response gene 3 product
|
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V$NGFIC.01 - Nerve growth factor-induced protein C
|
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V$WT1.01 - Wilms Tumor Suppressor
|
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V$BKLF.01 - Basic krueppel-like factor (KLF3)
|
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V$EKLF.01 - Erythroid krueppel like factor (EKLF)
|
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V$KKLF.01 - Kidney-enriched kruppel-like factor, KLF15
|
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V$ER.01 - Estrogen receptor
|
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V$ER.02 - Canonical palindromic estrogen response element (ERE)
|
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V$ERR.01 - Estrogen related receptor
|
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V$CETS1P54.01 - c-Ets-1(p54)
|
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V$ELF2.01 - Ets - family member ELF-2 (NERF1a)
|
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V$ELK1.01 - Elk-1
|
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V$ELK1.02 - Elk-1
|
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V$ETS1.01 - c-Ets-1 binding site
|
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V$ETS2.01 - c-Ets-2 binding site
|
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V$FLI.01 - ETS family member FLI
|
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V$GABP.01 - GABP: GA binding protein
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V$GABPB1.01 - GA repeat binding protein, beta 1)
|
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V$NRF2.01 - Nuclear respiratory factor 2
|
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V$PDEF.01 - Prostate-derived Ets factor
|
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V$PEA3.01 - Polyomavirus enhancer A binding protein 3, ETV4 (Ets variant gene 4)
|
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V$PU1.01 - Pu.1 (Pu120) Ets-like transcription factor identified in lymphoid B-cells
|
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V$SPI1_PU1.01 - Spleen focus forming virus (SFFV) proviral integration oncogene Spi1/transcription factor PU.1
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V$SPI1_PU1.02 - Spleen focus forming virus (SFFV) proviral integration oncogene Spi1/transcription factor PU.1
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V$SPIB.01 - Spi-B transcription factor (Spi-1/PU.1 related)
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V$EVI1.01 - Ecotropic viral integration site 1 encoded factor
|
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V$EVI1.02 - Ecotropic viral integration site 1 encoded factor
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V$EVI1.03 - Ecotropic viral integration site 1 encoded factor
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V$EVI1.04 - Ecotropic viral integration site 1 encoded factor
|
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V$EVI1.05 - Ecotropic viral integration site 1 encoded factor
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V$EVI1.06 - Ecotropic viral integration site 1 encoded factor
|
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V$EVI1.07 - Evi-1 zinc finger protein, carboxy-terminal zinc finger domain
|
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V$MEL1.01 - MEL1 (MDS1/EVI1-like gene 1) DNA-binding domain 1
|
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V$MEL1.02 - MEL1 (MDS1/EVI1-like gene 1) DNA-binding domain 2
|
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V$MEL1.03 - MEL1 (MDS1/EVI1-like gene 1) DNA-binding domain 2
|
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V$FAST1.01 - FAST-1 SMAD interacting protein
|
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V$FAST1.02 - Forkhead box H1 (Foxh1)
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V$FHXA.01 - Fork head homologous X binds DNA with a dual sequence specificity (FHXA and FHXB)
|
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V$FHXB.01 - Fork head homologous X binds DNA with a dual sequence specificity (FHXA and FHXB)
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V$FKHRL1.01 - Fkh-domain factor FKHRL1 (FOXO)
|
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V$FREAC2.01 - Fork head related activator-2 (FOXF2)
|
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V$FREAC3.01 - Fork head related activator-3 (FOXC1)
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V$FREAC4.01 - Fork head related activator-4 (FOXD1)
|
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V$FREAC7.01 - Fork head related activator-7 (FOXL1)
|
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V$HFH1.01 - HNF-3/Fkh Homolog 1 (FOXQ1)
|
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V$HFH2.01 - HNF-3/Fkh Homolog 2 (FOXD3)
|
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V$HFH3.01 - HNF-3/Fkh Homolog 3 (FOXI1, Freac-6)
|
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V$HFH8.01 - HNF-3/Fkh Homolog-8 (FOXF1)
|
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V$HNF3B.01 - Hepatocyte Nuclear Factor 3beta (FOXA2)
|
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V$ILF1.01 - Winged-helix transcription factor IL-2 enhancer binding factor (ILF), forkhead box K2 (FOXK2)
|
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V$XFD1.01 - Xenopus fork head domain factor 1 (FoxA4a)
|
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V$XFD2.01 - Xenopus fork head domain factor 2 (FoxI1a)
|
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V$XFD3.01 - Xenopus fork head domain factor 3 (FoxA2a)
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V$GAGA.01 - GAGA-Box
|
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V$GATA.01 - GATA binding factor
|
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V$GATA1.01 - GATA-binding factor 1
|
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V$GATA1.02 - GATA-binding factor 1
|
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V$GATA1.03 - GATA-binding factor 1
|
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V$GATA1.04 - GATA-binding factor 1
|
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V$GATA1.05 - GATA-binding factor 1
|
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V$GATA1.06 - Complex of Lmo2 bound to Tal-1, E2A proteins, and GATA-1, half-site 2
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V$GATA2.01 - GATA-binding factor 2
|
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V$GATA2.02 - GATA-binding factor 2
|
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V$GATA3.01 - GATA-binding factor 3
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V$GATA3.02 - GATA-binding factor 3
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V$LMO2COM.02 - complex of Lmo2 bound to Tal-1, E2A proteins, and GATA-1, half-site 2
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V$GCM1.01 - Glial cells missing homolog 1, chorion-specific transcription factor GCMa
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V$GFI1.01 - Growth factor independence 1 zinc finger protein acts as transcriptional repressor
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V$GFI1.02 - Growth factor independence 1
|
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V$GFI1B.01 - Growth factor independence 1 zinc finger protein Gfi-1B
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V$GKLF.01 - Gut-enriched Krueppel-like factor
|
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V$GKLF.02 - Gut-enriched Krueppel-like factor
|
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V$GLI1.01 - Zinc finger transcription factor GLI1
|
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V$GLI1.02 - Glioma-associated oncogene homolog 1
|
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V$GLI2.01 - GLI-Kruppel family member GLI2
|
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V$GLI3.01 - GLI-Kruppel family member GLI3
|
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V$ZIC2.01 - Zinc finger transcription factor, Zic family member 2 (odd-paired homolog, Drosophila)
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V$ARE.01 - Androgene receptor binding site
|
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V$ARE.02 - Androgene receptor binding site
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V$GRE.01 - Glucocorticoid receptor, C2C2 zinc finger protein binds glucocorticoid dependent to GREs
|
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V$PRE.01 - Progesterone receptor binding site
|
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V$GRHL3.01 - Grainyhead-like 3 (sister-of-mammalian grainyhead - SOM)
|
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V$GZF1.01 - GDNF-inducible zinc finger protein 1 (ZNF336)
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V$AML1.01 - AML1/CBFA2 Runt domain binding site
|
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V$AML3.01 - Runt-related transcription factor 2 / CBFA1 (core-binding factor, runt domain, alpha subunit 1)
|
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V$HAND2_E12.01 - Heterodimers of the bHLH transcription factors HAND2 (Thing2) and E12
|
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V$HSF1.01 - Heat shock factor 1
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V$HSF1.02 - Heat shock factor 1
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V$HSF1.03 - Heat shock factor 1
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V$HSF2.01 - Heat shock factor 2
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V$HSF2.02 - Heat shock factor 2
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V$HEN1.01 - HEN1
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V$HEN1.02 - HEN1
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V$HELT.01 - Hey-like bHLH-transcriptional repressor
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V$HES1.01 - Drosophila hairy and enhancer of split homologue 1 (HES-1)
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V$HES1.02 - Drosophila hairy and enhancer of split homologue 1 (HES-1)
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V$HIC1.01 - Hypermethylated in cancer 1, transcriptional repressor containing five Kręppel-like C2H2 zinc fingers, for optimal binding multiple binding sites are required.
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V$ARNT.01 - AhR nuclear translocator homodimers
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V$CLOCK_BMAL1.01 - Binding site of Clock/BMAL1 heterodimer, NPAS2/BMAL1 heterodimer
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V$DEC1.01 - Basic helix-loop-helix protein known as Dec1, Stra13 or Sharp2
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V$DEC2.01 - Basic helix-loop-helix protein known as Dec2 or Sharp2
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V$HIF1.01 - Hypoxia induced factor-1 (HIF-1)
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V$HIF1.02 - Hypoxia inducible factor, bHLH / PAS protein family
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V$HRE.01 - Hypoxia response elements, binding sites for HIF1alpha/ARNT heterodimers
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V$MTBF.01 - Muscle-specific Mt binding site
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V$HNF1.01 - Hepatic nuclear factor 1
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V$HNF1.02 - Hepatic nuclear factor 1
|
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V$HNF1.03 - Hepatic nuclear factor 1
|
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V$HNF4.01 - Hepatic nuclear factor 4
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V$HNF4.02 - Hepatic nuclear factor 4
|
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V$HPF1.01 - HepG2-specific P450 2C factor-1 (ZNF83)
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V$HNF6.01 - Liver enriched Cut - Homeodomain transcription factor HNF6 (ONECUT)
|
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V$OC2.01 - CUT-homeodomain transcription factor Onecut-2
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V$DLX1.01 - DLX-1, -2, and -5 binding sites
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V$DLX3.01 - Distal-less 3 homeodomain transcription factor
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V$DLX3.02 - Distal-less homeobox 3
|
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V$EN1.01 - Homeobox protein engrailed (en-1)
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V$HHEX.01 - Hematopoietically expressed homeobox, proline-rich homeodomain protein
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V$MSX.01 - Homeodomain proteins MSX-1 and MSX-2
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V$MSX2.01 - Muscle segment homeo box 2, homologue of Drosophila (HOX 8)
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V$NOBOX.01 - Homeobox containing germ cell-specific transcription factor NOBOX
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V$S8.01 - Binding site for S8 type homeodomains
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V$HOX_PBX.01 - HOX/PBX binding sites
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V$PBX1.01 - Homeo domain factor Pbx-1
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V$PBX_HOXA9.01 - PBX - HOXA9 binding site
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V$BARX2.01 - Barx2, homeobox transcription factor that preferentially binds to paired TAAT motifs
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V$CRX.01 - Cone-rod homeobox-containing transcription factor / otx-like homeobox gene
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V$GSC.01 - Vertebrate bicoid-type homeodomain protein Goosecoid
|
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V$GSH1.01 - Homeobox transcription factor Gsh-1
|
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V$GSH2.01 - Homeodomain transcription factor Gsh-2
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V$HOX1-3.01 - Hox-1.3, vertebrate homeobox protein
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V$HOXA9.01 - Member of the vertebrate HOX - cluster of homeobox factors
|
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V$HOXB9.01 - Abd-B-like homeodomain protein Hoxb-9
|
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V$HOXC13.01 - Homeodomain transcription factor HOXC13
|
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V$NANOG.01 - Homeobox transcription factor Nanog
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V$OTX2.01 - Homeodomain transcription factor Otx2 (homolog of Drosophila orthodenticle)
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V$PCE1.01 - Photoreceptor conserved element 1
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V$PHOX2.01 - Phox2a (ARIX) and Phox2b
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V$PTX1.01 - Pituitary Homeobox 1 (Ptx1, Pitx-1)
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V$MEIS1A_HOXA9.01 - Meis1a and Hoxa9 form heterodimeric binding complexes on target DNA
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V$MEIS1B_HOXA9.01 - Meis1b and Hoxa9 form heterodimeric binding complexes on target DNA
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V$IK1.01 - Ikaros 1, potential regulator of lymphocyte differentiation
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V$IK2.01 - Ikaros 2, potential regulator of lymphocyte differentiation
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V$IK3.01 - Ikaros 3, potential regulator of lymphocyte differentiation
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V$LYF1.01 - LyF-1 (Ikaros 1), enriched in B and T lymphocytes
|
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V$INSM1.01 - Zinc finger protein insulinoma-associated 1 (IA-1) functions as a transcriptional repressor
|
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V$IRF1.01 - Interferon regulatory factor 1
|
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V$IRF2.01 - Interferon regulatory factor 2
|
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V$IRF3.01 - Interferon regulatory factor 3 (IRF-3)
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V$IRF4.01 - Interferon regulatory factor (IRF)-related protein (NF-EM5, PIP, LSIRF, ICSAT)
|
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V$IRF4.02 - Interferon regulatory factor 4
|
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V$IRF7.01 - Interferon regulatory factor 7 (IRF-7)
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V$ISRE.01 - Interferon-stimulated response element
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V$LEF1.01 - TCF/LEF-1, involved in the Wnt signal transduction pathway
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V$LEF1.02 - TCF/LEF-1, involved in the Wnt signal transduction pathway
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V$LHX3.01 - Homeodomain binding site in LIM/Homeodomain factor LHX3
|
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V$LHX3.02 - LIM-homeodomain transcription factor LHX3
|
|
V$LMX1B.01 - LIM-homeodomain transcription factor
|
|
V$TAACC.01 - Lentiviral TATA upstream element
|
|
V$MAZ.01 - Myc associated zinc finger protein (MAZ)
|
|
V$MAZR.01 - MYC-associated zinc finger protein related transcription factor
|
|
V$AMEF2.01 - Myocyte enhancer factor
|
|
V$HMEF2.01 - Myocyte enhancer factor
|
|
V$MEF2.01 - Myogenic enhancer factor 2
|
|
V$MEF2.02 - Myogenic MADS factor MEF-2
|
|
V$MEF2.03 - Myogenic MADS factor MEF-2
|
|
V$MEF2.04 - Myogenic MADS factor MEF-2
|
|
V$MEF2.05 - MEF2
|
|
V$MEF2.06 - Myocyte-specific enhancer factor 2
|
|
V$MEF2.07 - Myocyte-specific enhancer factor 2
|
|
V$MMEF2.01 - Myocyte enhancer factor
|
|
V$RSRFC4.01 - Related to serum response factor, C4
|
|
V$RSRFC4.02 - Related to serum response factor, C4
|
|
V$SL1.01 - Member of the RSRF (related to serum response factor) protein family from Xenopus laevis
|
|
V$MEF3.01 - MEF3 binding site, present in skeletal muscle-specific transcriptional enhancers
|
|
V$MUSCLE_INI.01 - Muscle Initiator Sequence
|
|
V$MUSCLE_INI.02 - Muscle Initiator Sequence
|
|
V$MIT.01 - MIT (microphthalmia transcription factor) and TFE3
|
|
V$MOK2.01 - Ribonucleoprotein associated zinc finger protein MOK-2 (mouse)
|
|
V$MOK2.02 - Ribonucleoprotein associated zinc finger protein MOK-2 (human)
|
|
V$MTF-1.01 - Metal transcription factor 1, MRE
|
|
V$E47.01 - MyoD/E47 and MyoD/E12 dimers
|
|
V$E47.02 - TAL1/E47 dimers
|
|
V$LMO2COM.01 - Complex of Lmo2 bound to Tal-1, E2A proteins, and GATA-1, half-site 1
|
|
V$MYF5.01 - Myf5 myogenic bHLH protein
|
|
V$MYOD.01 - Myoblast determination gene product
|
|
V$MYOD.02 - Myoblast determining factor
|
|
V$MYOGENIN.01 - Myogenic bHLH protein myogenin (myf4)
|
|
V$MYOGENIN.02 - Myogenic bHLH protein myogenin (myf4)
|
|
V$TAL1_E2A.01 - Complex of Lmo2 bound to Tal-1, E2A proteins, and GATA-1, half-site 1
|
|
V$MYOGNF1.01 - Myogenin / nuclear factor 1 or related factors
|
|
V$MYT1.01 - MyT1 zinc finger transcription factor involved in primary neurogenesis
|
|
V$MYT1.02 - MyT1 zinc finger transcription factor involved in primary neurogenesis
|
|
V$MYT1L.01 - Myelin transcription factor 1-like, neuronal C2HC zinc finger factor 1
|
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V$MZF1.01 - Myeloid zinc finger protein MZF1
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V$MZF1.02 - Myeloid zinc finger protein MZF1
|
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V$MZF1.03 - Myeloid zinc finger protein MZF1
|
|
V$NEUROD1.01 - DNA binding site for NEUROD1 (BETA-2 / E47 dimer)
|
|
V$NEUROG.01 - Neurogenin 1 and 3 (ngn1/3) binding sites
|
|
V$NF1.01 - Nuclear factor 1
|
|
V$NF1.02 - Nuclear factor 1 (CTF1)
|
|
V$NF1.03 - Non-palindromic nuclear factor I binding sites
|
|
V$NFAT.01 - Nuclear factor of activated T-cells
|
|
V$NFAT5.01 - Nuclear factor of activated T-cells 5
|
|
V$CREL.01 - c-Rel
|
|
V$HIVEP1.01 - ZAS domain transcription factor: human immunodeficiency virus type 1 enhancer-binding protein-1 (HIVEP1), major histocompatibility complex-binding protein-1 (MBP-1), positive regulatory domain II-binding factor 1 (PRDII-BF1)
|
|
V$NFKAPPAB.01 - NF-kappaB
|
|
V$NFKAPPAB.02 - NF-kappaB
|
|
V$NFKAPPAB.03 - NF-kappaB
|
|
V$NFKAPPAB50.01 - NF-kappaB (p50)
|
|
V$NFKAPPAB65.01 - NF-kappaB (p65)
|
|
V$HMX2.01 - Hmx2/Nkx5-2 homeodomain transcription factor
|
|
V$HMX2.02 - Hmx2/Nkx5-2 homeodomain transcription factor
|
|
V$HMX3.01 - H6 homeodomain HMX3/Nkx5.1 transcription factor
|
|
V$HMX3.02 - Hmx3/Nkx5-1 homeodomain transcription factor
|
|
V$NKX25.01 - Homeo domain factor Nkx-2.5/Csx, tinman homolog, high affinity sites
|
|
V$NKX25.02 - Homeo domain factor Nkx-2.5/Csx, tinman homolog low affinity sites
|
|
V$NKX25.03 - Homeodomain factor Nkx-2.5/Csx
|
|
V$NKX31.01 - Prostate-specific homeodomain protein NKX3.1
|
|
V$NKX32.01 - Homeodomain protein NKX3.2 (BAPX1, NKX3B, Bagpipe homolog)
|
|
V$OLF1.01 - Olfactory neuron-specific factor
|
|
V$OLF1.02 - Olfactory neuron-specific factor
|
|
V$COUP.02 - Chicken ovalbumin upstream promoter (COUP-TF), DR0 sites
|
|
V$HNF4.03 - Hepatic nuclear factor 4, DR1 sites
|
|
V$PNR.01 - Photoreceptor-specific nuclear receptor subfamily 2, group E, member 3 (Nr2e3)
|
|
V$TR2_TR4.01 - DR1 binding sites for TR2 homodimers or TR2/TR4 heterodimers
|
|
V$TR4.02 - TR4 homodimer, DR1 site
|
|
V$NRF1.01 - Nuclear respiratory factor 1 (NRF1), bZIP transcription factor that acts on nuclear genes encoding mitochondrial proteins
|
|
V$NRL.01 - Neural retinal basic leucine zipper factor (bZIP)
|
|
V$NRSE.01 - Neural-restrictive-silencer-element
|
|
V$NRSF.01 - Neuron-restrictive silencer factor
|
|
V$ROAZ.01 - Rat C2H2 Zn finger protein involved in olfactory neuronal differentiation
|
|
V$OCT.01 - Octamer binding site (OCT1/OCT2)
|
|
V$OCT1.01 - Octamer-binding factor 1
|
|
V$OCT1.02 - Octamer-binding factor 1
|
|
V$OCT1.04 - Octamer-binding factor 1
|
|
V$OCT1.05 - Octamer-binding factor 1
|
|
V$OCT1.06 - Octamer-binding factor 1
|
|
V$OCT3_4.01 - POU domain, class 5, transcription factor 1
|
|
V$TST1.01 - POU-factor Tst-1/Oct-6
|
|
V$OCT1P.01 - Octamer-binding factor 1, POU-specific domain
|
|
V$P53.01 - Tumor suppressor p53
|
|
V$P53.02 - Tumor suppressor p53 (5' half site)
|
|
V$P53.03 - Tumor suppressor p53 (3' half site)
|
|
V$P53.04 - Tumor suppressor p53
|
|
V$P53.05 - Tumor suppressor p53
|
|
V$P53.06 - Tumor suppressor p53
|
|
V$DBP.01 - Albumin D-box binding protein
|
|
V$PAX1.01 - Pax1 paired domain protein, expressed in the developing vertebral column of mouse embryos
|
|
V$PAX2.01 - Zebrafish PAX2 paired domain protein
|
|
V$PAX3.01 - Pax-3 paired domain protein, expressed in embryogenesis, mutations correlate to Waardenburg Syndrome
|
|
V$PAX3.02 - Pax-3 paired domain protein
|
|
V$PAX4.01 - Pax-4 homeodomain binding site, together with PAX-6 involved in pancreatic development
|
|
V$PAX5.01 - B-cell-specific activating protein
|
|
V$PAX5.02 - B-cell-specific activating protein
|
|
V$PAX5.03 - PAX5 paired domain protein
|
|
V$PAX9.01 - Zebrafish PAX9 binding sites
|
|
V$PAX4_PD.01 - PAX4 paired domain binding site
|
|
V$PAX6.01 - Pax-6 paired domain binding site
|
|
V$PAX6.02 - PAX6 paired domain and homeodomain are required for binding to this site
|
|
V$PAX6.03 - Pax-6 paired domain binding site
|
|
V$PAX6.04 - PAX6 paired domain binding site
|
|
V$PAX8.01 - PAX 2/5/8 binding site
|
|
V$PBX1_MEIS1.01 - Binding site for a Pbx1/Meis1 heterodimer
|
|
V$PBX1_MEIS1.02 - Binding site for a Pbx1/Meis1 heterodimer
|
|
V$PBX1_MEIS1.03 - Binding site for a Pbx1/Meis1 heterodimer
|
|
V$ACAAT.01 - Avian C-type LTR CCAAT box
|
|
V$CAAT.01 - Cellular and viral CCAAT box
|
|
V$ISL1.01 - Pancreatic and intestinal lim-homeodomain factor
|
|
V$PDX1.01 - Pdx1 (IDX1/IPF1) pancreatic and intestinal homeodomain TF
|
|
V$PPARA.01 - PPAR/RXR heterodimers
|
|
V$PPAR_RXR.01 - PPAR/RXR heterodimers
|
|
V$PPAR_RXR.02 - PPAR/RXR heterodimers
|
|
V$PIT1.01 - Pit1, GHF-1 pituitary specific pou domain transcription factor
|
|
V$PLAG1.01 - Pleomorphic adenoma gene (PLAG) 1, a developmentally regulated C2H2 zinc finger protein
|
|
V$PLZF.01 - Promyelocytic leukemia zink finger (TF with nine Krueppel-like zink fingers)
|
|
V$PPARG.01 - Pal3 motif, bound by a PPAR-gamma homodimer
|
|
V$BLIMP1.01 - Transcriptional repressor B lymphocyte-induced maturation protein-1 (Blimp-1, prdm1)
|
|
V$PRDM1.01 - PRDI binding factor 1
|
|
V$PTF1.01 - PTF1 binding sites are bipartite with an E-box and a TC-box (RBP-J/L) spaced one helical turn apart
|
|
V$PURALPHA.01 - Purine-rich element binding protein A
|
|
V$PXRCAR.01 - Halfsite of PXR (pregnane X receptor)/RXR resp. CAR (constitutive androstane receptor)/RXR heterodimer binding site
|
|
V$RAR.01 - Retinoic acid receptor, member of nuclear receptors
|
|
V$RAR.02 - Retinoic acid receptor, member of nuclear receptors, DR5 site
|
|
V$RTR.01 - Retinoid receptor-related testis-associated receptor (GCNF/RTR)
|
|
V$BRIGHT.01 - Bright, B cell regulator of IgH transcription
|
|
V$RBPJK.01 - Mammalian transcriptional repressor RBP-Jkappa/CBF1
|
|
V$RBPJK.02 - Mammalian transcriptional repressor RBP-Jkappa/CBF1
|
|
V$CLTR_CAAT.01 - Mammalian C-type LTR CCAAT box
|
|
V$EBVR.01 - Epstein-Barr virus transcription factor R
|
|
V$NBRE.01 - Monomers of the nur subfamily of nuclear receptors (nur77, nurr1, nor-1)
|
|
V$REV-ERBA.01 - Orphan nuclear receptor rev-erb alpha (NR1D1)
|
|
V$REV-ERBA.02 - Orphan nuclear receptor rev-erb alpha (NR1D1), monomer binding site
|
|
V$REV-ERBA.03 - Orphan nuclear receptor rev-erb alpha (NR1D1), homodimer DR2 binding site
|
|
V$RORA.01 - RAR-related orphan receptor alpha
|
|
V$RORA1.01 - RAR-related orphan receptor alpha1
|
|
V$RORA2.01 - RAR-related orphan receptor alpha2
|
|
V$RORGAMMA.01 - RAR-related orphan receptor gamma
|
|
V$T3R.01 - vErbA, viral homolog of thyroid hormone receptor alpha1
|
|
V$TR2.01 - Nuclear hormone receptor TR2, half site
|
|
V$TR4.01 - Nuclear hormone receptor TR4 homodimer binding site
|
|
V$VERBA.01 - vErbA, viral homolog of thyroid hormone receptor alpha1
|
|
V$RP58.01 - Zinc finger protein RP58 (ZNF238), associated preferentially with heterochromatin
|
|
V$RREB1.01 - Ras-responsive element binding protein 1
|
|
V$RU49.01 - Zinc finger transcription factor RU49 (zinc finger proliferation 1 - Zipro 1). RU49 exhibits a strong preference for binding to tandem repeats of the minimal RU49 consensus binding site.
|
|
V$SMARCA3.01 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3
|
|
V$SMARCA3.02 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3
|
|
V$CAR_RXR.01 - Constitutive androstane receptor / retinoid X receptor heterodimer, DR4 sites
|
|
V$FXRE.01 - Farnesoid X - activated receptor (RXR/FXR dimer)
|
|
V$LXRE.01 - Nuclear receptor involved in the regulation lipid homeostasis
|
|
V$LXRE.02 - Highly conserved DR1 element selected by LXRbeta/RXR heterodimers
|
|
V$PXR_RXR.01 - Pregnane X receptor / retinoid X receptor heterodimer, DR4 sites
|
|
V$RAR_RXR.01 - Retinoic acid receptor / retinoid X receptor heterodimer, DR1 sites
|
|
V$RAR_RXR.02 - Retinoic acid receptor / retinoid X receptor heterodimer, DR2 sites
|
|
V$RAR_RXR.03 - Retinoic acid receptor / retinoid X receptor heterodimer, DR5 sites
|
|
V$RXR_RXR.01 - Retinoid X receptor homodimer, DR1 sites
|
|
V$THR.01 - THR/RXR heterodimer and THR homodimer DR4 binding sites
|
|
V$VDR_RXR.01 - VDR/RXR Vitamin D receptor RXR heterodimer site
|
|
V$VDR_RXR.02 - VDR/RXR Vitamin D receptor RXR heterodimer site
|
|
V$VDR_RXR.03 - Bipartite binding site of VDR/RXR heterodimers without a spacer between directly repeated motifs
|
|
V$VDR_RXR.04 - Bipartite binding site of VDR/RXR heterodimers: 2 spacer nucleotides between the two directly repeated motifs
|
|
V$VDR_RXR.05 - Bipartite binding site of VDR/RXR heterodimers: 3 spacer nucleotides between the two directly repeated motifs
|
|
V$VDR_RXR.06 - Bipartite binding site of VDR/RXR heterodimers: 4 spacer nucleotides between the two directly repeated motifs
|
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V$SATB1.01 - Special AT-rich sequence-binding protein 1, predominantly expressed in thymocytes, binds to matrix attachment regions (MARs)
|
|
V$FTF.01 - Alpha (1)-fetoprotein transcription factor (FTF), liver receptor homologue-1 (LRH-1)
|
|
V$SF1.01 - SF1 steroidogenic factor 1
|
|
V$SIX3.01 - SIX3 / SIXdomain (SD) and Homeodomain (HD) transcription factor
|
|
V$SMAD.01 - Sma- and Mad-related proteins
|
|
V$SMAD3.01 - Smad3 transcription factor involved in TGF-beta signaling
|
|
V$SMAD4.01 - Smad4 transcription factor involved in TGF-beta signaling
|
|
V$PSE.01 - Proximal sequence element (PSE) of RNA polymerase II-transcribed snRNA genes
|
|
V$PSE.02 - Proximal sequence element (PSE) of RNA polymerase III-transcribed genes
|
|
V$HBP1.01 - HMG box-containing protein 1
|
|
V$HMGA.01 - HMGA family of architectural transcription factors (HMGA1, HMGA2)
|
|
V$HMGIY.01 - HMGI(Y) high-mobility-group protein I (Y), architectural transcription factor organizing the framework of a nuclear protein-DNA transcriptional complex
|
|
V$SOX5.01 - Sox-5
|
|
V$SOX9.01 - SOX (SRY-related HMG box)
|
|
V$SOX9.02 - SRY (sex-determining region Y) box 9
|
|
V$SRY.01 - Sex-determining region Y gene product
|
|
V$BTEB3.01 - Basic transcription element (BTE) binding protein, BTEB3, FKLF-2
|
|
V$GC.01 - GC box elements
|
|
V$SP1.01 - Stimulating protein 1 SP1, ubiquitous zinc finger transcription factor
|
|
V$SP1.02 - Stimulating protein 1, ubiquitous zinc finger transcription factor
|
|
V$SP2.01 - Sp2, member of the Sp/XKLF transcription factors with three C2H2 zinc fingers in a conserved carboxyl-terminal domain
|
|
V$TIEG.01 - TGFbeta-inducible early gene (TIEG) / Early growth response gene alpha (EGRalpha)
|
|
V$SRF.01 - Serum response factor
|
|
V$SRF.02 - Serum response factor
|
|
V$SRF.03 - Serum responsive factor
|
|
V$STAF.01 - Se-Cys tRNA gene transcription activating factor
|
|
V$STAF.02 - Se-Cys tRNA gene transcription activating factor
|
|
V$ZNF76_143.01 - ZNF143 is the human ortholog of Xenopus Staf, ZNF76 is a DNA binding protein related to ZNF143 and Staf
|
|
V$STAT.01 - Signal transducers and activators of transcription
|
|
V$STAT1.01 - Signal transducer and activator of transcription 1
|
|
V$STAT3.01 - Signal transducer and activator of transcription 3
|
|
V$STAT5.01 - STAT5: signal transducer and activator of transcription 5
|
|
V$STAT6.01 - STAT6: signal transducer and activator of transcription 6
|
|
V$MEIS1.01 - Binding site for monomeric Meis1 homeodomain protein
|
|
V$TGIF.01 - TG-interacting factor belonging to TALE class of homeodomain factors
|
|
V$ATATA.01 - Avian C-type LTR TATA box
|
|
V$LTATA.01 - Lentivirus LTR TATA box
|
|
V$MTATA.01 - Muscle TATA box
|
|
V$TATA.01 - Cellular and viral TATA box elements
|
|
V$TATA.02 - Mammalian C-type LTR TATA box
|
|
V$TCF11.01 - TCF11/KCR-F1/Nrf1 homodimers
|
|
V$HLF.01 - Hepatic leukemia factor
|
|
V$TEAD.01 - TEA domain-containing factors, transcriptional enhancer factors 1,3,4,5
|
|
V$TEF.01 - Thyrotrophic embryonic factor
|
|
V$TEF1.01 - TEF-1 related muscle factor
|
|
V$TEF_HLF.01 - Thyrotrophic embryonic factor / hepatic leukemia factor
|
|
V$GTF3R4.01 - GTF2I-like repeat 4 of GTF3
|
|
V$TFII-IR4.01 - GTF2I repeat 4 of the general transcription factor II, i (GTF2I)
|
|
V$THAP1.01 - THAP domain containing, apoptosis associated protein
|
|
V$TTF1.01 - Thyroid transcription factor-1 (TTF1) binding site
|
|
V$VBP.01 - PAR-type chicken vitellogenin promoter-binding protein
|
|
V$VMYB.01 - v-Myb
|
|
V$VMYB.02 - v-Myb
|
|
V$VMYB.03 - v-Myb, viral myb variant from transformed BM2 cells
|
|
V$VMYB.04 - v-Myb, AMV v-myb
|
|
V$VMYB.05 - v-Myb, variant of AMV v-myb
|
|
V$WHN.01 - Winged helix protein, involved in hair keratinization and thymus epithelium differentiation
|
|
V$MIF1.01 - MIBP-1 / RFX1 complex
|
|
V$RFX1.01 - X-box binding protein RFX1
|
|
V$RFX1.02 - X-box binding protein RFX1
|
|
V$XBOX.01 - Motif bound by regulatory factor X (RFX) proteins
|
|
V$YY1.01 - Yin and Yang 1
|
|
V$YY1.02 - Yin and Yang 1 repressor sites
|
|
V$ZBP89.01 - Zinc finger transcription factor ZBP-89
|
|
V$ZF9.01 - Core promoter-binding protein (CPBP) with 3 Krueppel-type zinc fingers
|
|
V$ZNF202.01 - Transcriptional repressor, binds to elements found predominantly in genes that participate in lipid metabolism
|
|
V$ZNF219.01 - Kruppel-like zinc finger protein 219
|
|
V$ZNF35.01 - Human zinc finger protein ZNF35
|
|
V$ZF5.01 - Zinc finger / POZ domain transcription factor
|
|
V$ZID.01 - Zinc finger with interaction domain
|
|
V$SZF1.01 - SZF1, hematopoietic progenitor-restricted KRAB-zinc finger protein
|
|
V$ZBRK1.01 - Transcription factor with 8 central zinc fingers and an N-terminal KRAB domain
|
|
I$ADF1.01 - Adf-1
|
|
I$BRCZ1.01 - Broad-Complex Z1 Zinc Finger isoform
|
|
I$BRCZ2.01 - Broad-Complex Z2 Zinc Finger isoform
|
|
I$BRCZ4.01 - Broad-Complex Z4 Zinc Finger isoform
|
|
I$CAD.01 - Drosophila homeodomain protein caudal, vertebrate homolog cdx
|
|
I$CF1.01 - chorion factor 1, homologous to retinoid X receptor
|
|
I$CF2II.01 - CF2-II, Zinc finger splice variant II
|
|
I$CF2II.02 - CF2-II, Zinc finger splice variant II
|
|
I$CROC.01 - Crocodile regulator of head development, member of fork head domain protein family
|
|
I$DL.01 - Dorsal, protein for dorso-ventral axis formation, homologous to vertebrate c-rel
|
|
I$DL.02 - Dorsal, protein for dorso-ventral axis formation, homologous to vertebrate c-rel
|
|
I$E74A.01 - E74A early ecdysone-inducible gene in onset of Drosophila metamorphosis
|
|
I$ELF1.01 - Drosophila Elf-1 (NTF-1), vertebrate homolog CP2 (human, mouse)
|
|
I$GCM.01 - glial cells missing
|
|
I$HAIRY.01 - Hairy, transcriptional repressor
|
|
I$BCD.01 - Bicoid, maternal effect gene in drosophila embryogenesis
|
|
I$DFD.01 - Deformed, homeotic gene in drosophila development
|
|
I$FTZ.01 - fushi tarazu, involved in body segmentation of the drosophila embryo
|
|
I$K50_HD.01 - K50 type homeodomain site selected with drosophila orthodenticle (OTD) homeodomain
|
|
I$HSF.01 - heat shock factor (Drosophila)
|
|
I$HSF.02 - heat shock factor (Drosophila)
|
|
I$HSF.03 - heat shock factor (Drosophila)
|
|
I$HSF.04 - heat shock factor (Drosophila)
|
|
I$HB.01 - Hunchback, early maternal and zygotic zinc finger gene, activated by bicoid
|
|
I$HB.02 - Hunchback, early maternal and zygotic zinc finger gene, activated by bicoid
|
|
I$KNI.01 - Drosophila gap gene knirps, involved in embryonic segmentation
|
|
I$KR.01 - Krueppel, zinc finger protein, involved in body segmentation of the drosophila embryo
|
|
I$PHO.01 - PHO (pleiohomeotic) and PHO-like, polycomp group proteins (PcG) binding to PREs (polycomb group response elements)
|
|
I$SN.01 - Snail zinc finger protein, involved in dorso-ventral patterning
|
|
I$SN.02 - Snail zinc finger protein, involved in dorso-ventral patterning
|
|
I$STAT.01 - signal transducers and activators of transcription
|
|
I$SUH.01 - Suppressor of Hairless, linked to notch pathway
|
|
I$DSX.01 - Drosophila Doublesex (DSX), involved in sex determination)
|
|
I$DTCF.01 - drosophila T-cell factor, homolog of TCF/LEF, interacts with Armadillo (b-Catenin homolog
|
|
I$TLL.01 - Drosophila gap gene tailless, involved in embryonic segmentation
|
|
I$TTK.01 - Tramtrack 69K zinc finger protein, binding sites in eve gene
|
|
I$GAF.01 - GAGA factor encoded by the Trithorax-like gene (Trl)
|
|
I$PAX6_HD.01 - Drosophila PAX6 P3 homeodomain binding site
|
|
I$PRD_HD.01 - Drosophila paired homeodomain
|
|
I$ZESTE.01 - Zeste transvection gene product
|
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